PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966414.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 292aa MW: 32144.7 Da PI: 8.5387

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	226	248	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ s+L H + H XP_022966414.1 226 QCPQCGAKFSSVSSLIDHVEKvH 248 7*****************99888 PP
2	zf-C2H2	15	7.1e-05	265	286	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp+C++ F ++ L+ Hi + H XP_022966414.1 265 CPKCSRGFVDPVALVEHIEReH 286 ******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MGTPEFPNLG KHCSFEDCKL IDFLPFTCDC CHQVFCLEHR SYNRHSCPKT DRRDVTVVIC 60 PLCAKGVRLI PDQDPNITWE IHVNTECDPS NYDKVTKKKK CPVPGCRELL TFSNTIKCRD 120 CLVDHCLKHR FGPDHKCSGP KKPEPAGFPF VGLLSRSRKE EKGPKKALPP TTSSSSWTTS 180 LLNAASSVKA SAEAGMTKLS NEINHAWKTK SSSSSNNGSA NRQIEQCPQC GAKFSSVSSL 240 IDHVEKVHEK GGNRPGAKKV VIDACPKCSR GFVDPVALVE HIEREHGGTS RA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-117	C2H2 family protein