PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966038.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 534aa MW: 58493.4 Da PI: 7.8263

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.9	1.1e-41	173	249	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrr++q XP_022966038.1 173 CQVYGCNKDLSSSKDYHKRHKVCEAHSKTAKVIVNGMEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRRPQV 249 **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MESWSYVSEG KGCMSDEMNS PTSSLARNKD SALGWDFKYP CNFSSTMLAT GQQVNNQGFG 60 ELVFPEMIGK QLPDICDILS SKVVGGRFLN PAVNSSNAFL GEDESTSKLS GSIVDSSGRD 120 SSFIDLNLGR FADQRDARGY KIFKGAPIVS SSESSMPSKR VRSSGLNSQT YFCQVYGCNK 180 DLSSSKDYHK RHKVCEAHSK TAKVIVNGME QRFCQQCSRF HLLAEFDDGK RSCRKRLAGH 240 NERRRRPQVA LNSGRAGRFL QSFNGSRLQG TPATSFICQE ILPGGIMHPE KYGTSDWCRT 300 VKIEDKNEYM PLSAVHVPSG HLHSKSLFSP YDIDTQIPPF HDNGLNAAAT NMFKENTNQY 360 PISVGGVFNN PSLGSEYFSV FSAATTDRIS GLSDSGCALS LLSSQTQNSS THSSGIPIAR 420 PLVLLEGQNH YSMSQLSEKL MGVSSQVSVS GVSNKFNSSG LNTLGPISTP ETSDAVNFES 480 TNRIFHVSNL ADTTEGSPTI DLLQLSSQLH RVEHERQVMQ VKQESNAFCC LRIT

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MESWSYVSEG KGCMSDEMNS PTSSLARNKD SALGWDFKYP CNFSSTMLAT GQQVNNQGFG  60
ELVFPEMIGK QLPDICDILS SKVVGGRFLN PAVNSSNAFL GEDESTSKLS GSIVDSSGRD  120
SSFIDLNLGR FADQRDARGY KIFKGAPIVS SSESSMPSKR VRSSGLNSQT YFCQVYGCNK  180
DLSSSKDYHK RHKVCEAHSK TAKVIVNGME QRFCQQCSRF HLLAEFDDGK RSCRKRLAGH  240
NERRRRPQVA LNSGRAGRFL QSFNGSRLQG TPATSFICQE ILPGGIMHPE KYGTSDWCRT  300
VKIEDKNEYM PLSAVHVPSG HLHSKSLFSP YDIDTQIPPF HDNGLNAAAT NMFKENTNQY  360
PISVGGVFNN PSLGSEYFSV FSAATTDRIS GLSDSGCALS LLSSQTQNSS THSSGIPIAR  420
PLVLLEGQNH YSMSQLSEKL MGVSSQVSVS GVSNKFNSSG LNTLGPISTP ETSDAVNFES  480
TNRIFHVSNL ADTTEGSPTI DLLQLSSQLH RVEHERQVMQ VKQESNAFCC LRIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	5e-46	SBP family protein