PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965735.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 437aa MW: 48721.3 Da PI: 7.4627

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.6	2.1e-35	33	177	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022965735.1 33 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdfqg 125 799**********.99***9987775553333333766646******.555666799**************7555555544 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022965735.1 126 GGETRWHKTGKTRPVMA-SGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 177 33778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MRSLRSIKSA DQSSAQGADT SLKPSRVQDW LGLPAGVKFD PTDQELIEHL EAKVEAKNDI 60 KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF HRPSKAYTTG TRKRRKIQTE 120 CDFQGGGETR WHKTGKTRPV MASGRQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGQH 180 EEEKEGELVV SKIFYQTQPR QCNWSSAEKG GGGGIGEVTG DNVVLSSRRE SGSGSCSSSR 240 EMATPRDEMS PVGGSGGLCP PPHIAVTYGG LDHIQQFKAD HFGFGSFRRN FDEVGIGEAS 300 TTRESAPTED IGDHHRHHHL QRQHHHPMAT TAFQITRPSN PISTIICPPP LHHSSIILDH 360 DSYRVSPLIL QNESFQQQQQ HHHKLGGRSA SGLEELIMGC TSSNIKEEST MGSNAQEAAE 420 WMKYSPFWPD PDNPNHH

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MRSLRSIKSA DQSSAQGADT SLKPSRVQDW LGLPAGVKFD PTDQELIEHL EAKVEAKNDI  60
KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF HRPSKAYTTG TRKRRKIQTE  120
CDFQGGGETR WHKTGKTRPV MASGRQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGQH  180
EEEKEGELVV SKIFYQTQPR QCNWSSAEKG GGGGIGEVTG DNVVLSSRRE SGSGSCSSSR  240
EMATPRDEMS PVGGSGGLCP PPHIAVTYGG LDHIQQFKAD HFGFGSFRRN FDEVGIGEAS  300
TTRESAPTED IGDHHRHHHL QRQHHHPMAT TAFQITRPSN PISTIICPPP LHHSSIILDH  360
DSYRVSPLIL QNESFQQQQQ HHHKLGGRSA SGLEELIMGC TSSNIKEEST MGSNAQEAAE  420
WMKYSPFWPD PDNPNHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-119	NAC family protein