PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965161.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 227aa MW: 25186.6 Da PI: 8.4989

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00089	5	27	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C++sF + L H++ H XP_022965161.1 5 HKCKLCSRSFVNGRALGGHMKAH 27 79******************998 PP
2	zf-C2H2	16.2	3.1e-05	127	149	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C ksF+++ L H +++ XP_022965161.1 127 FRCGKCEKSFRSNRALFGHRKVC 149 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MAESHKCKLC SRSFVNGRAL GGHMKAHLAT FSIEHENPIK TLRSPDPEML CISTIQDRES 60 ETESKNPTRR RSKRTRRFKS ESPPSSEPAS SISDTSPEED VAICLVMLSM EQGKEQSRTP 120 VTMGKSFRCG KCEKSFRSNR ALFGHRKVCR NEGEEDGING GEWKIFKCCY CCKVFGSGQA 180 LGGHKRSHLQ GSIRAAIDGG SRKLEIGLDL NLPAPLEEDD YSVVSFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	6e-26	C2H2 family protein