PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022965083.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 371aa    MW: 42502.6 Da    PI: 9.3592
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022965083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00014126149123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     y C  Cg+ F +++ L++H +  H
  XP_022965083.1 126 YLCRVCGRNFYTNEKLVNHFKQiH 149
                     56*****************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MCKEFLAMIA FIRFRNLSYQ FRKETELIRR FHSGTNLKSN SPDSSCSAVA IFWDLDNKPP  60
KSLPPYEAAV KLKAAAASFG AVRYMVAYAN RHAFSYVPQV VREKRRERKM LNQLERKGVI  120
KSIEPYLCRV CGRNFYTNEK LVNHFKQIHE SEHKKRLNQI ESAKGSRRVK LLAKYSMKIQ  180
KYKNAARDVL TPKEGYGLAD ELKRAGFFVK TVSDKPEAAD VELRNDMVEV MDRRRAECLV  240
LVSDDSDFVN VLKEAKLRCL RTVVVGDLND GPLKRNADTG FSWKEILMGK AKKEAVSVVG  300
KWKDRDVLKR LEWTYNPQLE KEVFGLDDDM GEDEDVEQGS VDENMTNGDS GAWWDLNSDA  360
ETEAVSSRSC K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.11e-150C2H2 family protein