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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027183775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | AP2 | ||||||||
Protein Properties | Length: 692aa MW: 75588.7 Da PI: 6.4723 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.1 | 3.3e-11 | 271 | 327 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g XP_027183775.1 271 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 327 57*******************4444.2455535555.779999**************98 PP | |||||||
2 | AP2 | 46.7 | 7.9e-15 | 370 | 421 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027183775.1 370 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 421 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 692 aa Download sequence |
MASMNNWLGF SLSPQEIPSQ PHQDHSQNTV PRLDTFSSEE LSGTDVSGDC FDLSSHASTI 60 PSLNLPAPFG ILEAFNRNNQ SQDWSFKELN MNSNTSYKTA GSEMSMLMGR ACNNNNHNLE 120 NQEPKLENFL GVGGQNSLHL PSQTVEASSS NGNGTIGLSM IKNWLRNNPS TSQPENKIIN 180 GNDGVVVCSN NAQNLSLSMS TGSQSTSALP LLTAASCSDG EGGGGESSTS DNTNTNKQQN 240 GGIGITSLDS QSGAIEAVPR KSIDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT 300 RKGRQGGYDK EEKAARAYDL AALKYWGTTT TTNFPISNYE KEIEEMKHMT RQEYVASLRR 360 KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR 420 GLNAVTNFEI SRYDVKSILE SSTLPIGGAA KRLKDAEQAE MALDAHRTNN DNLSSHLTDG 480 MSSYGAQHAW PTIAFQQAQP LTMHYPYGQQ QRLWCKQEND SDVSHSFHDL HQLQLGNTHN 540 FLQPSVLHNL MSLDSSSMEH SSSCNSVIYS NGSNDNAAYQ GVGYGSSSSY LLPMSTTVIA 600 EEGSQNQGNG FGENGVKAIG YENMFGSSDP YQTRNFYYHP LPSSNGTLRA GLYDQGSSCN 660 TWVPTGVPTL VARTNNMAVC HGSSTFTVGN DT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 1e-125 | AP2 family protein |