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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027151189.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 28207.1 Da PI: 7.9707 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.4 | 2.8e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss XP_027151189.1 9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 105.8 | 5.2e-35 | 84 | 174 | 10 | 100 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + + + ++ e++kLk++ie Lqr++Rh++GedL+ +s k+Lq+Le+qL+++lk+iR++Kn+l++e+i+elq+kek++q++n +L kk++e XP_027151189.1 84 DLESEGDWTLEYTKLKAKIELLQRNHRHYMGEDLDAMSSKDLQNLEHQLDTALKQIRTRKNQLMYESISELQRKEKAIQQQNSMLAKKIKE 174 45556789********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGKVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYSSD 60 SSMENILERY ERYSYAERRL VANDLESEGD WTLEYTKLKA KIELLQRNHR HYMGEDLDAM 120 SSKDLQNLEH QLDTALKQIR TRKNQLMYES ISELQRKEKA IQQQNSMLAK KIKEKEKLMA 180 QQAQWEQQNQ GPSSTPYLIP EPLPPCINVS GNYEEETQEA RRNELELTLD SLFPCHLGCF 240 TA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-105 | MIKC_MADS family protein |