PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992280.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 298aa    MW: 32154.8 Da    PI: 8.1269
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.71.2e-3251104358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                      v YkeClkNhAa++G+havDGCgEfmps+ +  ++ +lkCaACgCHRnFHRr++ 
  XP_024992280.1  51 VVAYKECLKNHAATIGSHAVDGCGEFMPSPVS--EPISLKCAACGCHRNFHRRDPI 104
                     689*************************9555..5******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDLKHITTNT SGAGADTPDS ETETLLHSQL GNPLSSFSNG KKHHRQPPPT VVAYKECLKN  60
HAATIGSHAV DGCGEFMPSP VSEPISLKCA ACGCHRNFHR RDPIDDNYAY APHVLLSLST  120
AADQNHTVAI PGTPAAIKIE NPNGRKRFRT KFSQDQKEKM SLFAEKVGWK MQRCDDKLVA  180
EFCNELGIRR GIFKVWMHNN KNTFGKKEKD ITSPTTTATA AAITTSTATV GISSKSINIF  240
NNGRPVICSD FHEENNNVDR RDNSNSSDQE NVGGGGGGGD CGRAVHLQAS TNGSSSSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.18e-56ZF-HD family protein