PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024990578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 251aa MW: 28406.5 Da PI: 9.0957 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 116.9 | 2e-36 | 15 | 143 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 rF Pt+ee v++yL +k++g++ ++l++vi+ v ++++ P +Lpk ++ ++++w+fF++r++++a+g r++r+t+s yWkatg+ v+s XP_024990578.1 15 SRFYPTEEEXVSFYLFNKLQGQRtHDLHRVIPVVPVNDHSPCHLPKlageLCRRDTEQWFFFVPRQEREAQGGRPSRTTASXYWKATGSPAYVYS 109 69*******************996677788***************656653444677************************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++g+kkt+vfy+g++++ ++t+W m+eyr+ XP_024990578.1 110 SDNKVIGVKKTMVFYEGKSQTVKRTEWKMNEYRA 143 ********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MAPIGNTLGN GPTNSRFYPT EEEXVSFYLF NKLQGQRTHD LHRVIPVVPV NDHSPCHLPK 60 LAGELCRRDT EQWFFFVPRQ EREAQGGRPS RTTASXYWKA TGSPAYVYSS DNKVIGVKKT 120 MVFYEGKSQT VKRTEWKMNE YRAIKKDIDN TNTSPVPKVY ILESRHELSL CRVYVVSGCT 180 RAFDRRPLGL EPTPMITYKA SQGAPSSQNT VQTYKTASPS DCSSPESSNR MVDTVGNIGL 240 VPEWEWQHLT G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 2e-78 | NAC family protein |