PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986453.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 288aa    MW: 32749.8 Da    PI: 7.1255
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA611.5e-19191225135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C t kTp+WR+gp g+ktLCnaCG++y++ +l
  XP_024986453.1 191 CVHCATDKTPQWRSGPMGPKTLCNACGVRYKSGRL 225
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEFEQFIVDN LLHFPTDDLH QEEQETDVTS TAVNTCNSTT LAGDLSCRSF VDTQFSNLCV  60
PYDDLAEFEW LSNFVEESFS NEDLQKLQLI SGLKARSENG TKNRQFQIRP AINRTDYNPV  120
FNINMMVPGK ARTKRSRAAS CNWASPLLIN SPTVTGPIPT TSLNFTSTSI EKKNVKKEFD  180
DNSNNEDGRK CVHCATDKTP QWRSGPMGPK TLCNACGVRY KSGRLVPEYR PAASPTFILT  240
KHSNSHRKVL ELRRQKQMQS VPQFIDHQNI NDDYLIPQHI GPDYRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.19e-82GATA family protein