PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024979613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | GATA | ||||||||
Protein Properties | Length: 350aa MW: 37954.7 Da PI: 6.3219 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 52.3 | 7.5e-17 | 261 | 297 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp+g++tLCnaCGl+++ kg+ XP_024979613.1 261 CRHCGISSksTPMMRRGPSGPRTLCNACGLKWANKGV 297 *****99999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MAEGNLNDQH HRQASIYETV NLQPVNLHHH QQQGISINNN DNQHHIVEDV VVQEDDDVAG 60 AEEESIDNPS QIRYDHHNPH HHHHQHHNIQ NNGSLEGGME EMSVQPHALY VPDSEIQPVS 120 AGGAGGGGGA DQLTLSFQGE VYVFDAVSPE KVQAVLLLLG GYEVPTGAPT MGMPPQNQRG 180 LTEFPGRSSQ PQRAASLSRF REKRKERCFD KKIRYSVRKE VALRMQRKKG QFTSSKAISD 240 EAGSASSDWN GGPGQDEETT CRHCGISSKS TPMMRRGPSG PRTLCNACGL KWANKGVLRD 300 LNKVSASGAP DPTGKAIEQS DGEANDTNAV NVNAIMVSNG GDNSAVTGER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 1e-85 | GATA family protein |