PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024979613.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 350aa    MW: 37954.7 Da    PI: 6.3219
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024979613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.37.5e-17261297135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  XP_024979613.1 261 CRHCGISSksTPMMRRGPSGPRTLCNACGLKWANKGV 297
                     *****99999************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MAEGNLNDQH HRQASIYETV NLQPVNLHHH QQQGISINNN DNQHHIVEDV VVQEDDDVAG  60
AEEESIDNPS QIRYDHHNPH HHHHQHHNIQ NNGSLEGGME EMSVQPHALY VPDSEIQPVS  120
AGGAGGGGGA DQLTLSFQGE VYVFDAVSPE KVQAVLLLLG GYEVPTGAPT MGMPPQNQRG  180
LTEFPGRSSQ PQRAASLSRF REKRKERCFD KKIRYSVRKE VALRMQRKKG QFTSSKAISD  240
EAGSASSDWN GGPGQDEETT CRHCGISSKS TPMMRRGPSG PRTLCNACGL KWANKGVLRD  300
LNKVSASGAP DPTGKAIEQS DGEANDTNAV NVNAIMVSNG GDNSAVTGER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-85GATA family protein