PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024978228.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 352aa MW: 38007.3 Da PI: 8.617 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 110.2 | 1.1e-34 | 68 | 124 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 ++Y+eClkNhAa++GghavDGCgEfmps++++ +++++lkCaACgCHRnFHRr+++e XP_024978228.1 68 ITYRECLKNHAAAMGGHAVDGCGEFMPSSTSTpTDPTSLKCAACGCHRNFHRRDPDE 124 79**************************99999********************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MEIPPSSPPP TTTTTTTNTT TAIKTLDPDT RIQPNTIPKH LPPPFSNGVL KRHKPRHLHH 60 INPMPVVITY RECLKNHAAA MGGHAVDGCG EFMPSSTSTP TDPTSLKCAA CGCHRNFHRR 120 DPDETFPNNP PTQHVIEYQP HHRHHPPPPP PQPISLAGAR GNSSSPPDSP SPPPISSSYY 180 PSAPHMLLAL SAGLSAPPPE NMNNPSIPIT PGSAPGIGSH PNGKKRFRTK FTQDQKDKMQ 240 ELAERVGWKM QKRDEDLIIG FCNEIGVEKG VFKVWMHNNK MNLGSKKDSG NQNDNGSYGG 300 AGAGAGGIDF LSNRDNNDNH HHHHHHQQQP HNDSISSGGG NVIGTNGSSS SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39760.1 | 1e-28 | ZF-HD family protein |