PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024977347.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 89aa    MW: 9547.46 Da    PI: 6.6512
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024977347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.51.2e-312074358
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                    ++rY eC+kNhAa++Gg+avDGC+Efm++ geegt+  ++CaACgCHRnFHRr+ve
  XP_024977347.1 20 TFRYGECQKNHAADIGGYAVDGCREFMAT-GEEGTTGEFTCAACGCHRNFHRRQVE 74
                    789*************************8.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MKKTSAAGSN GTSSASLIQT FRYGECQKNH AADIGGYAVD GCREFMATGE EGTTGEFTCA  60
ACGCHRNFHR RQVELEESST NCNHLHLAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.12e-25ZF-HD family protein