PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024977088.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 270aa    MW: 29694.3 Da    PI: 8.6108
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024977088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.84.5e-3254106457
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                      rY+eClkNhAa++Gg+ +DGCgEfmps g++gt +alkCaAC+CHRnFHR+e 
  XP_024977088.1  54 PRYRECLKNHAANMGGNITDGCGEFMPS-GDDGTLEALKCAACNCHRNFHRKEY 106
                     69*************************9.999********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MQTSSPYNNN HLIRESSSET VDHGLDPDRF PGTGASVTPI SVGSKLLKSP VQMPRYRECL  60
KNHAANMGGN ITDGCGEFMP SGDDGTLEAL KCAACNCHRN FHRKEYPTTS PSAAGPFLQL  120
PPPLPSPSPS PSFHHHHHHH RTPPPTISLH HHPNWASSIN APPVKMAFGG SGGAATESSS  180
EELNFTTAGV APLYGMTKKR FRTKFTQDQK DKMLEFAEKV GWRIPREDDP EVQRFCAEVG  240
VKRQVLKVWM HNNKATSGKK QVQDSNESIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.14e-51ZF-HD family protein