PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975759.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 29733.6 Da PI: 9.1898 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 136.3 | 2e-42 | 7 | 139 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 +pGfrF Pt+eel+++yLk+ +eg++ +++vi+++++y++ PwdLp+ +k++ ++w+fF++r++k+++g r++r tksgyWkatg+ XP_024975759.1 7 TPGFRFYPTEEELITFYLKHTIEGTPrllQAINRVIPHLHVYDFYPWDLPQyageLCKGDPEQWFFFIPRQEKETRGGRTSRLTKSGYWKATGSP 101 79************************886566678***************645654455777********************************* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 v+s++++ + +k+t+vfy+grap+g+kt+W m+ey+ XP_024975759.1 102 SVVYSSGNRRIAIKRTMVFYNGRAPTGKKTKWKMNEYK 139 *************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEGGMVTPGF RFYPTEEELI TFYLKHTIEG TPRLLQAINR VIPHLHVYDF YPWDLPQYAG 60 ELCKGDPEQW FFFIPRQEKE TRGGRTSRLT KSGYWKATGS PSVVYSSGNR RIAIKRTMVF 120 YNGRAPTGKK TKWKMNEYKA FQEEVSSTTK PKIKLMQELS ICRVYIKSNC LRAFDRRPSG 180 VVVTEPRPIQ QSLHNNDHHA TTLTYSNHRA AIERTICSSD NNYNSSQDHT SSSGLMREFD 240 DQPLWDWEEH YYSLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 3e-78 | NAC family protein |