PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975663.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 318aa    MW: 34865.8 Da    PI: 6.6664
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.39.2e-18239273135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C + kTp+WR gp g ktLCnaCG++y++ +l
  XP_024975663.1 239 CSHCLVQKTPQWRAGPLGAKTLCNACGVRYKSGRL 273
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MECVEGALKS SFIGVKPNNH HHPQSFSDDF WAGNGVPGDD FFVDGLLDFS EDGDFEEEND  60
VLLNPHDINN DKPLSVSRLK PENDESIAGF TIPENDLCLP PDDVADLEWV SHFVDDSFSG  120
GYSLTCPAGK FPEKKSEPEP ETIVTVKPSF TSPVLTKARS KRTRTGGRVW SRGSSPLTDS  180
STSSSSSSSC TSNPWLFFHD SNQTAESIFG KPPVKRQKKK HQAAAVETAG AGPQQPRRCS  240
HCLVQKTPQW RAGPLGAKTL CNACGVRYKS GRLLPEYRPA CSPTFSSEVH SNNHRKVLEM  300
RQKKEAADAG LTLLVRSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.24e-61GATA family protein