PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975647.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 316aa    MW: 35706 Da    PI: 9.9356
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.56.4e-33111167360
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                     +vrY+eClkNhA+++G+h++DGCgEfmps ge+gt++alkCaAC+CHR+FHRreve e
  XP_024975647.1 111 AVRYRECLKNHAVNMGTHVLDGCGEFMPS-GEDGTPEALKCAACECHRSFHRREVEGE 167
                     69**************************9.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
METRERNSLN YNNPPQSNQE SSSRSSTAPL ISSPTSNTRR NETPDHPHLH LHQGNHYRGF  60
KLQKEQLEPQ RPRRNPNPGP DPARLVSQPP AQPLPPAPEP STIARAAATV AVRYRECLKN  120
HAVNMGTHVL DGCGEFMPSG EDGTPEALKC AACECHRSFH RREVEGESQS GYYTQQMASQ  180
IPSTHNQPPR AATVQLPPPQ SPQQRHHRHH QPVQPIMMAF GGASGTPAES SSEDLNIFRT  240
NGGAQLMAQM SKKRFRTKFT EDQKDKMHDF AERIGWKIQK QDEQEVLRFC NEVGLKKQVF  300
KVWMHNNKQA TKKKQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.11e-62ZF-HD family protein