PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975433.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 363aa MW: 41308.9 Da PI: 5.0206 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.5 | 7.5e-55 | 10 | 139 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL + ++ e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_024975433.1 10 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLIErcRIGYeEQTEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 103 69****************************.9***************743433332667************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k +l+g++ktLvfykgrap+g+ktdW+mheyrle XP_024975433.1 104 YE-KLRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 139 **.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MDTMDQSSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIRDIDLYRI EPWDLIERCR 60 IGYEEQTEWY FFSHKDKKYP TGTRTNRATM AGFWKATGRD KAVYEKLRLI GMRKTLVFYK 120 GRAPNGQKTD WIMHEYRLES EENGPPQEEG WVVCRAFKKR STGQTKHVEG WESNFFYDDS 180 SRVSPAMDPV DYITNQPPSS VFSQSFMCKQ ELEAAESLNF VHCDQFVQLP QLESPSLPST 240 KRPISSISLV SSSENNDQED DLAGSGGRNI NNNSKNNKEN ANKVTDWRAL DKFVASQLSH 300 EDRYGVGEGL SSSFEGKEHS DLAYMFMEGG REEEDGGGGG KLNGLLSSIS QDHCDIGICI 360 FDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36160.1 | 1e-150 | NAC family protein |