PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 322aa MW: 35882 Da PI: 7.4905 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.9 | 2.8e-16 | 111 | 207 | 1 | 94 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f k+l +sdv+ ++r+vlpkk ae+h ++ +e++ l + d +g +W +k+++ +++s++yvl+ G+ eF+++++L+ gD +++++d+ + XP_024975196.1 111 FSKKLQKSDVGVLKRIVLPKKPAETHlpALIAKEGIILEMDDMDGmHVWCFKFRFwpNNNSRMYVLE-GTGEFAEEHELQLGDYIMLYRDS-VNL 203 889*************************8888999*******9988*******9989999999***9.********************554.555 PP ..EE CS B3 91 elvv 94 ++v+ XP_024975196.1 204 NYVI 207 5555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MERNEACALR AFAGFDIGLG INFGGVQDNT YKTKKPAAAA AAAATATATD RDLVAAARFD 60 FLKKKRMPRF RRGASAALRS FRPFTTPLSS TVSSSSFVGP IVDQGRLTFL FSKKLQKSDV 120 GVLKRIVLPK KPAETHLPAL IAKEGIILEM DDMDGMHVWC FKFRFWPNNN SRMYVLEGTG 180 EFAEEHELQL GDYIMLYRDS VNLNYVIQAV KAYEVEEYAK KEVKANLGSQ GKSGKPQPNN 240 GVLMNQNWPW GGLEVEVLNP TNYPMNASTV EDQMGMTFIY DTSYSNDTLT PLDFLGGFMT 300 SYPTVQPNFA IENLSIDDLY KI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26790.1 | 2e-45 | B3 family protein |