PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024974943.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 117aa MW: 12821.2 Da PI: 5.5942 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 99.4 | 2.6e-31 | 37 | 98 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee...gtaaalkCaACgCHRnFHRreveee 60 ++vrY eC++NhAa++Gg+avDGC+Efm++ g++ t a+l+CaACgCHRnFHRr ve+e XP_024974943.1 37 THVRYGECQRNHAANIGGYAVDGCREFMAAAGDQeeeETEASLTCAACGCHRNFHRRVVETE 98 579*************************9976542236699****************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MTKRRVVLKR EEPPPPPLPP PPPPSMDSAN SSNTMRTHVR YGECQRNHAA NIGGYAVDGC 60 REFMAAAGDQ EEEETEASLT CAACGCHRNF HRRVVETEVV CSSDDSWPSS SSSPYLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 9e-32 | ZF-HD family protein |