PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024974434.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 233aa MW: 27026.2 Da PI: 5.3879 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 177.2 | 4.4e-55 | 6 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv++yLk+k++g+++el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v+ XP_024974434.1 6 LPPGFRFHPTDEELVNYYLKRKIHGQQIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVT 99 79****************************.99**************84335556888************************************* PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +++++g+kktLv+y+grap+g +tdWvmheyrl XP_024974434.1 100 SQgqNNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 136 *9767777***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MAPVGLPPGF RFHPTDEELV NYYLKRKIHG QQIELDIIPE VDLYKCEPWE LAEKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTS QGQNNRAIGM KKTLVYYRGR 120 APQGIRTDWV MHEYRLDDKD SHDTFGIQDS YALCRVFKKN GVCVELEDIN GHASMSMVQY 180 SPTVTNDYET MSPDVPVASS SCLDEDDKDE SWMQFITDDP WCSPNSPQQT LTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 1e-127 | NAC family protein |