PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 87aa MW: 9421.63 Da PI: 8.7107 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 95.5 | 4.3e-30 | 21 | 76 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +v+Y +ClkNhAas+G +avDGC+Efm+s g egt al CaACgCHRnFHRr+v+e XP_024971820.1 21 TVHYGQCLKNHAASIGRYAVDGCREFMAS-GGEGTRGALSCAACGCHRNFHRRDVDE 76 799*************************9.8899*******************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MKKQQVVIKK NKTSSPSVIR TVHYGQCLKN HAASIGRYAV DGCREFMASG GEGTRGALSC 60 AACGCHRNFH RRDVDEVACE CSSTSDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 4e-31 | ZF-HD family protein |