PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024969857.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 304aa    MW: 33717.5 Da    PI: 6.8959
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024969857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.9e-19200234135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WRrgp g+ktLCnaCG++y++ +l
  XP_024969857.1 200 CLHCGSDKTPQWRRGPMGPKTLCNACGVRYKSGRL 234
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MAAYFQHQKT PTDFTTALNH FTIDDLLVDF PNDDGEVVMN DAFFQNFTSN SADNSSFSGS  60
EPHLSSNITS FSGAELCVPY DDLAELEWLS SFTEESFSSD DLHNLKLISA ANKVPTTDTS  120
SSDTTPRIIG SNRVNSPIFQ TDVLVPGKVR SKRSRAAPCD WSSRLILLKS SSSTEINLQP  180
KTMPSKTATA DGSENSVRRC LHCGSDKTPQ WRRGPMGPKT LCNACGVRYK SGRLVPEYRP  240
AASPSFVPAK HSNSHRKVME LRRQMELRNS HQPFLNHNSN SDGCNTTDDY LIHSQMGPSF  300
MHMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-66GATA family protein