PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024968442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 190aa MW: 21878.2 Da PI: 4.6463 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 120.2 | 1.9e-37 | 8 | 128 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeelvv++L++k++ + + ++i+++++y ++PwdL+ k+ ae k+wy+Fs+r++ +nrat++g+Wk+ g d++++s+ XP_024968442.1 8 LPPGFRFCPTDEELVVHFLHRKASLLPYHP-DIIPDLGLYPCDPWDLDGKAMAEGKKWYYFSRRSH-------ENRATSNGFWKSCGGDEQIVSS 94 79*************************998.89**************977778899******9976.......68*****************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g+kk vf+ g+ap+g kt+W+m+e+r+ XP_024968442.1 95 nGSKRIGVKKYYVFHVGEAPEGIKTNWIMQEFRV 128 67778***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MGETNVNLPP GFRFCPTDEE LVVHFLHRKA SLLPYHPDII PDLGLYPCDP WDLDGKAMAE 60 GKKWYYFSRR SHENRATSNG FWKSCGGDEQ IVSSNGSKRI GVKKYYVFHV GEAPEGIKTN 120 WIMQEFRVSD ASTTSSRSRR RDTSKSDWVI CRVYEHDYDN DDDNDDGMEL SCLDEVFLSL 180 DDFDDISFPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 4e-58 | NAC family protein |