PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024965244.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | SRS | ||||||||
Protein Properties | Length: 123aa MW: 12900.3 Da PI: 5.4925 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 83.7 | 4.4e-26 | 3 | 54 | 102 | 153 |
DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 + ++P+ev+s+avfrcvrvs++d++ee+laYqta +igGhvfkGiLyd+G+e XP_024965244.1 3 VGHFPAEVNSPAVFRCVRVSAMDEAEEQLAYQTALNIGGHVFKGILYDHGPE 54 678***********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
LEVGHFPAEV NSPAVFRCVR VSAMDEAEEQ LAYQTALNIG GHVFKGILYD HGPEGRYNNP 60 GEGSSSGGGG AQLQQLITSG RTAGATASTS IHPAVNFIDP SSTYPTPFSA FMAGTQFFPP 120 PRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 2e-30 | SRS family protein |