PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28201.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family AP2
Protein Properties Length: 537aa    MW: 60109.6 Da    PI: 5.9662
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.79.1e-11119165454
         AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                  G+r++k +gr++AeI dp     + k+++lg+f+t e+A +a+   + ++e
  PHU28201.1 119 VGIRRRK-SGRYFAEISDPI----QhKKVYLGTFDTIEQASQAYFSKKSEFE 165
                 69**999.7*********82....46*****************987776665 PP

2AP232.71.9e-10210253451
         AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 
                  G+r++k +gr++AeI dp     + k+++lg+f+t e+A +a+   + 
  PHU28201.1 210 VGIRRRK-SGRYFAEISDPI----QhKKVYLGTFDTIEQASQACLSKKS 253
                 69**999.7*********82....46**********7777766655444 PP

3AP229.42e-09319363552
         AP2   5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                 GV   k+ gr+ +eI  p     + k+++lg+f+taeeA  a+   +++
  PHU28201.1 319 GVNKSKTIGRYTSEITNPI----TkKKIWLGTFDTAEEASHAYQSKKLE 363
                 9*************99972....36*****************9776665 PP

Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MRGKYNYEST SPISKKRVWL DTFGTAEEAS RVDHHSKKLE FDVMLSHSEQ HGRSEVDASI  60
SNADNVGIDR RIDCHEIGTG EEASRVFNSC LMANVHGAES SDECNITRSC DPKDKIRLVG  120
IRRRKSGRYF AEISDPIQHK KVYLGTFDTI EQASQAYFSK KSEFENLRKG NKDDKPKKNC  180
DQIQQPESPS VVETLNTATS CDPKDKIRLV GIRRRKSGRY FAEISDPIQH KKVYLGTFDT  240
IEQASQACLS KKSKFEKLRQ GNKDLSCADS SLLSPSNIDK DNKTEPEPPS VVASLDTAVS  300
ASGRDKRIGS RKRKAHTVGV NKSKTIGRYT SEITNPITKK KIWLGTFDTA EEASHAYQSK  360
KLEFQNLVKA KQQQCTKAQT HSEQDAEKEK SVNVEQGHEN VNCEPFQLES YVGSPDVDVL  420
LSNASSGETV QSTDSDKIGN TEEAFHVYQS KKLDDSESPQ KVELQSNTQT DSSAGEKQEG  480
QEDDEDLWMG EWMQLPGNRA VKFSLKLGLP IIDNYGYLLG EFSSLDDLSI CETEDDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117125RLVGIRRRK
2208216RLVGIRRRK
3213254RRRKSGRYFAEISDPIQHKKVYLGTFDTIEQASQACLSKKSK
4311341RKRKAHTVGVNKSKTIGRYTSEITNPITKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-13ERF family protein