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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU20643.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 330aa MW: 36756.2 Da PI: 8.5733 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.4 | 4.9e-15 | 87 | 138 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PHU20643.1 87 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 138 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MNFFVMYLLV GGYAILINSV YLGGYDMEDK AARAYDQAAL KYWGPSTHIN FPLENYQKEL 60 EEMKHMTRQE YVAHLRRKSS GFSRGASIYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS 120 TQEEAAEAYD VAAIKFRGVN AVTNFDISRY DVEKIMASNT LPAGELARRT KEREPRESIE 180 YNNISVHKNE ECVQNNNNNG NITDWKMVLY QASNPSIGSN NYRNPSFSVA LQDLIGIDSI 240 NNSTSHATIL DHEQNKIGAN HFSNASSLVT SLGSSREASP DKTAASLVFA KPTKFVVPST 300 NVNACIPSAQ LRPIPVSMAH LPVFATLNDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 2e-95 | AP2 family protein |