PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO93415
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 325aa    MW: 34683 Da    PI: 6.2414
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO93415genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.36.8e-33182239259
               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
               +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp +v++tYeg+H h+
  OMO93415 182 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPAIVITTYEGQHCHH 239
               8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MEDKEGADPG GTEFTSDSSW SLPSGPVDSV SDGVNYFFDR ESSILSEFGW NLHPVDDHPH  60
HDIERFAELD RAESCSRPLD LAGNFSASQS CAASAAAAGS GGGGGGGGSS SGTASNPGLS  120
ADVSTSNNPS VSSSSSEDPP EKSTGSGGKP PEIPSKARKK GQKRIRQPRF AFMTKSEVDH  180
LEDGYRWRKY GQKAVKNSPF PRSYYRCTNS KCTVKKRVER SSEDPAIVIT TYEGQHCHHS  240
VGFPRGGLIS HEAAAFAAGQ FTPTVSQFYY PGVQLNREIL PSITQSQQVP ISAADSARSL  300
PEPTPQLPTD EGLLGDMVPP GMRNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.21e-68WRKY family protein