PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO85692
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 321aa    MW: 35399.7 Da    PI: 9.1046
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO85692genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.81.2e-29158216158
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
               ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed++vv+ tYegeHnh
  OMO85692 158 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSIEDQSVVVATYEGEHNH 216
               58***************************99**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDSSSWVDTS LDLNASARSL RLETPKKETS SNLFVFGKKF SVKEESGALV EELNRVSAEN  60
KKLTEMLTAM CESYNALQSQ LMDLMSKNPE KELSPASKKR KSESINNENN NNFGIHIGNS  120
ESSSTDEESS KKPREEIIKA KISRVYVRTE ASDTTLVVKD GYQWRKYGQK VTRDNPSPRA  180
YFKCSFAPSC PVKKKVQRSI EDQSVVVATY EGEHNHLPPS QMEATSGSSR CMSLGSVPCS  240
ASLNPTGPTI TLDLTKSKSS NSEEIARNII SNKQKMESSS SSPEVRKYLV EQMASSLTKD  300
PNFTAALAAA ISGRMFSTKS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-96WRKY family protein