PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO78893
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 366aa    MW: 39967.2 Da    PI: 10.0577
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO78893genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.44.4e-31294351359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYeg+Hnh+
  OMO78893 294 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPRMLIVTYEGDHNHS 351
               99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MAVELMMGYG SGASFAGKME ETALREAATA GLQGVEELIK LMSKSQQLYN RDASFKTSSL  60
PQAQEPAMEI QAVTDKTVNS FKKVISLLDR PRTGHARFRR APLAPIQQED KPNQQEEDAA  120
AEQQPRQKIQ ESGPSVQVNK DQVSAFKPFC PTPVHRLPPK PHNHQSKSSP LLGSRSGSLL  180
EKNNEAPTTT INFSSSPPLS AGNSFMSSLT GDTDSMQPSL SSGFQFTSPS HLPSSGKPPL  240
SSSLKRKCNS MDDAALKCGS SSSRCHCSKK RKSKLRRVIR VPAISNKMAD IPPDDFSWRK  300
YGQKPIKGSP HPRGYYKCSS VRGCPARKHV ERALDDPRML IVTYEGDHNH SHNVTDAPGA  360
LVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.15e-93WRKY family protein