PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO75947
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 391aa    MW: 43715.5 Da    PI: 6.3729
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO75947genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.66.8e-30146207159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp+++eitY+g+H+++
  OMO75947 146 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDEDPTIFEITYRGRHTCN 207
               59***************************98999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MENMREWEQR NLINELTEGR ELAKQVQLHL SVPSSPCHDQ TRELILLVQK IQASYEKALS  60
ILNFNTSLLA ADHQQPPQAQ PQPSGVAMIR MPESPPSRSG SPRSEDSDRD FKEQQEFKDA  120
SKKRKTLPRW TQLVRVTPGT ALEGPLDDGF SWRKYGQKDI LGAKYPRGYY RCTHRNVQGC  180
LATKQVQRSD EDPTIFEITY RGRHTCNLGL PTSHSHSHSH ALPLPLPPPP ASAPPENQDQ  240
PTTNCMEPNQ NQNQNQQPEP NQINQSQDLL LNFQRGLKVI TENLDNNTSF PYHNNNNPSS  300
STTPISNVKG EETSNVFSPC VVGNLSATTN NYFAVSPTPT GMMMNINLGT SEIIQAVTSA  360
TNSPTVALDH FPFGNTEFDP NFTFDNHGFL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.18e-49WRKY family protein