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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO71367 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | AP2 | ||||||||
Protein Properties | Length: 414aa MW: 45942.4 Da PI: 9.3661 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.8 | 2.6e-13 | 64 | 120 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g OMO71367 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 120 57*******************6666777775555599******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence |
MASTSSSDPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQGA YDDEEAAARA YDLAALKYWG 120 PGTLINFPVT DYARDLEEMQ NVSREDYLAS LRRKSSGFSR GISKYRGLSS RWDSSFGRVA 180 GSEYFNSMHY SDDPATESDY IGGFCIDRKI DLTGYIKWWG TNKTRQAESG TKLSEDTKHA 240 CPEDIGSELK TSEWAVQPTE PYQMPRLGTS LERIKRKGSS VSALSILSRS ADFKSLKDKA 300 LKKKENSTDN DENENKNTIN KMDHGKAAEK SVNHDTGSER LGATLAMSGG LSLQKNVFPL 360 TPFLSAPLLT NYNTIDSLVD PVLWTSLVPV LPSGPSRNPE VGISLKAFSL KELE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-153 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO71367 |