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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO69626 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WRKY | ||||||||
Protein Properties | Length: 206aa MW: 23305.1 Da PI: 9.2273 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.7 | 1.6e-25 | 140 | 186 | 1 | 47 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv 47 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++ OMO69626 140 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRM 186 59****************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MEGERGVGNY ELQVSFSSTP QAIHEMGFVQ FDQENQAAVM SFLAPAAAAA QPPSHQISQP 60 LNTSSISNTT NSTAMGFSHN DQVGTLDPKA VNDENCASNA NDGNNSWWRS SASDKNKVKV 120 RRKLREPRFC FQTRSDVDVL DDGYKWRKYG QKVVKNSLHP RSYYRCTHNN CRVKKRVERL 180 SEDCRMDMSI LQKKPDDLKP FVVKVN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 119 | 125 | KVRRKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44745.1 | 1e-56 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO69626 |