![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OMO68537 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 556aa MW: 61078.9 Da PI: 6.6458 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.6 | 2.4e-11 | 171 | 227 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g OMO68537 171 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 227 57*******************5444.2455536655.779999**************98 PP | |||||||
2 | AP2 | 47.1 | 6.1e-15 | 272 | 321 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g OMO68537 272 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 321 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 556 aa Download sequence |
MGSMNSNNWL SFPLSPTNAS LPSHLHSSQA HQFNLGLVND TMENPFQAQE WNLINTHDTS 60 EVPKVADFLG VSKSESPSLD LVGFNDIHHH QPNDSDYSFQ NNSTIVPVQT AIVPNNNNSY 120 EFQENANNLQ ALTLSMGSGK GSTCETSGEN STNTVEAPPR RTLDTFGQRT SIYRGVTRHR 180 WTGRYEAHLW DNSCRREGQS RKGRQGGYDK EEKAARAYDL AALKYWGTST TTNFPISNYE 240 KELEEMKHMT RQEFVAAIRR KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG 300 TFSTEEEAAE AYDIAAIKFR GLNAVTNFDM SRYDVKAILE SNTLPIGGGA AKRLKEAQAL 360 ESSRKREEMI ALGSTFQYGN SSSTRLQPYP LIQAPFEQPP QPLLTLHNED ISQYAQDTSS 420 FHQSYIQTQL QLHQQSGSNF LHQSAGQNSG FYNGYMQGNP ALFHGLMNNM GVSSSSVVDN 480 NGSSSGSYST GGYLGNGIGM ASNSTAGNAV GSTEELSLVK VDYDMPAGGG GGGYGGWSRD 540 SVHQGSNPGV FTMWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G51190.1 | 0.0 | AP2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OMO68537 |