PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO64022
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 322aa    MW: 35635 Da    PI: 7.2361
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO64022genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.63.1e-34160217259
               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
               +Dgy+WrKYGqK vk+s+fprsYYrCts++C+vkk+vers +dp++v++tYeg+H+h+
  OMO64022 160 EDGYRWRKYGQKAVKNSPFPRSYYRCTSTSCNVKKRVERSFNDPTIVVTTYEGQHTHP 217
               8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MERKEGVKME DVMGNPSPFS DCLASGFGFP LQSIFDLSEG EKIPLGFMEL LGVQDSLMMS  60
SYSPPLFDMT HQLPSLATQA PNPTKIESPE VFNQPATPNS SSISSASSEA VNDEPVKAEE  120
DQEEDQQKTK KQLKPKKTNQ KRQREPRFAF MTKSEVDHLE DGYRWRKYGQ KAVKNSPFPR  180
SYYRCTSTSC NVKKRVERSF NDPTIVVTTY EGQHTHPSPL MPRPTLGGAH LSSALSAAGA  240
AATFGLPMQR TTTSPSLYQQ QQSFGIGIGN GLSPLNFGHN GSNNINASFL NERRFCTPTG  300
QSLLKDHGLL QDILPSHMLK EE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.13e-64WRKY family protein