PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO64003
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 285aa    MW: 31591.9 Da    PI: 4.6751
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO64003genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-3065123259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs+fpr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  OMO64003  65 SDLWSWRKYGQKPIKGSPFPRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTSSHNHP 123
               699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MAEGKEKVVM DASVSPKLDS KGLEESELKS PENQASKRRK VVEKTVVTVK IGENSGKLKN  60
EGPPSDLWSW RKYGQKPIKG SPFPRGYYRC STSKGCSAKK QVERCRTDAS MLIITYTSSH  120
NHPGPDPHAT NSPKEPSSAV NGEDQPPTPK QQEEVAEQDQ ETAEEEVETE PIKTSSVKNG  180
SEEEQFHYLQ SPLRSPQNII VSQEDPFNGN LEKTQDHSLG FLLDEEPLSS CPHISITTTT  240
TTATPPTSEE NDFFDELEEL PISSAFTSFM MRSKFFDEGI PVVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.14e-34WRKY family protein