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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO53862 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WRKY | ||||||||
Protein Properties | Length: 252aa MW: 28784.9 Da PI: 8.5416 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 70.8 | 1.9e-22 | 103 | 163 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ +++++r+Y+rCt++ gC+++k+v++ ++dp ++Y g+H+++ OMO53862 103 DDGYAWRKYGQKTILNANHSRNYFRCTHKndqGCQATKQVQQIEDDPPKYRTIYYGHHTCK 163 8***************************99999**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSWDKKRAIE ELAKGKDLTN QLRDLLNGSN YLVGSEDLVM KIFNSFSNTL SILRNSSSGD 60 YDEVSQLNPR NNNSYDGRKD RRGCYKRRKC GDSWTRDTLT LFDDGYAWRK YGQKTILNAN 120 HSRNYFRCTH KNDQGCQATK QVQQIEDDPP KYRTIYYGHH TCKTLLKASQ LILDSTTSND 180 SSILLSFTNN TKQDDPFFSC FPSPVKQETK ESDLQQPASD ITCNRSSSSS SDYLLSSPHN 240 VRLISSNHNV VC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-38 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO53862 |