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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG59354.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | AP2 | ||||||||
Protein Properties | Length: 543aa MW: 60998.7 Da PI: 9.7209 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22.3 | 3.3e-07 | 135 | 177 | 2 | 51 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 ++GV+ k+ +Wv +Ir+ + +++lg f ++ eAa+++++a+ GBG59354.1 135 IFRGVY--KTGLKWVTHIRV------NgNTVYLGAFFSEVEAARLYDRAAY 177 689**7..43457*******......44**********99********985 PP | |||||||
2 | AP2 | 30.3 | 1e-09 | 327 | 370 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 s+++GV+ + + +W A I++ + k+ +lg+ t+e Aa ++++a+ GBG59354.1 327 SQFRGVYKN--NSKWQAGIKV------NgKQLHLGTVSTEEAAAHLYDRAAY 370 789***855..56********......44*********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 543 aa Download sequence |
MVSIRKKKSI ADLRTKSVKQ EPQSSSQPAS SVVEPAVATP GEGQVVSSSP SEYVQGSPRL 60 FAEQEIIAKR SELSLTPPTG DRASNAVHPD TENSAQSLKK RKRISSIERD HDRTRNREWD 120 GDEPLQPPPN KLQSIFRGVY KTGLKWVTHI RVNGNTVYLG AFFSEVEAAR LYDRAAYICK 180 RPPNFVMTDE EKNALDKLAW DEFLTKTKQE IAILAARQEK KDRNNNSVEP PRRVSHYTGV 240 FSTGRKWVAH IRVDGSTVFL GVVNSEDEAS HLFDRIHTIL LKLQTKCLSA TLRERYPSGR 300 LVPCEMRNGV DQYVHAVDEV KKLKEKSQFR GVYKNNSKWQ AGIKVNGKQL HLGTVSTEEA 360 AAHLYDRAAY ILGRDTNLPI VTAEKEDLDK MTWEEFIAST KGGMLLKRDC RAKLSGRGGA 420 RLKTRGRNTA QCDTEEKRED QPVMVQPERE EVARLSPPVT RRSSIMAGRD RDRECSPAKD 480 SSLRAKRTKT DSAGHGKVQN FDQGSDSSMH FADVNDTANA ADDTESRTRW MISCLVEALE 540 QHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 2e-20 | ERF family protein |