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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT59720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 257aa MW: 29047.8 Da PI: 7.0365 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.2 | 1e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k ien nrqvtfskRr+g+lKKA+ELSvLCd evaviifsstgkl+e+ss PHT59720.1 9 KLIENVNNRQVTFSKRRAGLLKKASELSVLCDSEVAVIIFSSTGKLFEFSS 59 569**********************************************96 PP | |||||||
2 | K-box | 54.1 | 6.9e-19 | 95 | 174 | 9 | 88 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 ++++ ++ q+e++ Lk+e+ +L+++q +llG+dL+ + l+eL+ Le+qL+++l i+++K+ell++q+e+++k+ +el+ PHT59720.1 95 QQTHFLKQEQKEVDSLKDELAKLKTKQLRLLGKDLNGMGLNELRLLEHQLNEGLLAIKERKEELLIQQLEHSRKQVEELR 174 44445678899****************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGRGKIDIKL IENVNNRQVT FSKRRAGLLK KASELSVLCD SEVAVIIFSS TGKLFEFSST 60 SMKQTLSRYN RCVSSTESSA VEKKSEGNEQ PQSQQQTHFL KQEQKEVDSL KDELAKLKTK 120 QLRLLGKDLN GMGLNELRLL EHQLNEGLLA IKERKEELLI QQLEHSRKQV EELRGLYPVS 180 SCLPTAYLEY HHPLEKKYPI LKESEESLDS DTACEDGVDN EDSNTTLQLG LPTIGRKRKK 240 PEQESPSSNS ENQVGSK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 236 | 240 | RKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 4e-61 | MIKC_MADS family protein |