PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58471.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family AP2
Protein Properties Length: 403aa    MW: 46496.7 Da    PI: 9.1132
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.11.2e-1479138155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+++GV++++++gr++A+++d  s+n    k+ k+++lg ++ +e Aa+a++ a+ k++g
  PHT58471.1  79 SRFRGVSRHRWTGRYEAHLWDkASWNVtqkKKgKQVYLGAYDEEESAARAYDLAAIKYWG 138
                 789******************877754655447*************************98 PP

2AP242.81.3e-13181232155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV +++ ++rW+A+I  ++    +k+ +lg++ t ee a+a++ a  + +g
  PHT58471.1 181 SKYRGVARHHHNNRWEARIGRVYG---NKYLYLGTYSTQEEVARAYDIAEIECRG 232
                 89****99***********99654...4*********************998877 PP

Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MNTYTSVEWE RMSRGIRRSL CMVDYDIPVN NKCTKRRRKS PASAVIMNDD NYNNGQKLDS  60
KKGDQNNIIV QTPTVKRSSR FRGVSRHRWT GRYEAHLWDK ASWNVTQKKK GKQVYLGAYD  120
EEESAARAYD LAAIKYWGTS TFTNFPMSDY EKEIENMQNM TKEEHLASLR RSSSGFARGV  180
SKYRGVARHH HNNRWEARIG RVYGNKYLYL GTYSTQEEVA RAYDIAEIEC RGTNAMTNFD  240
MNTYMRWLKP DANSQMSFQD LTSENQPIQS NNSGDMINRI NDPSYSFNPS CFTTNAEKFY  300
AIPQSQEPIE RKMPFSSCKK SPSSTALSLL LRSSMFQELV EKNSSTDSEE SSVKNEAQSS  360
TENEFVFYTN DKKLPKLESL ENGTSSVLCD RSGQQQYFWS LMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.38e-89AP2 family protein