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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT57666.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 1190aa MW: 132940 Da PI: 7.2243 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.2 | 7.3e-12 | 127 | 174 | 5 | 56 |
AP2 5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 G+r+ k +gr+ A Ird +rk+++lg+f+t eeA +a+ + +++le+e PHT57666.1 127 GIRRQK-TGRYGAVIRDtI----RRKQVWLGTFDTVEEASQAYFNKKLELENE 174 999877.9*********33....35*************************986 PP | |||||||
2 | AP2 | 34.8 | 4e-11 | 279 | 326 | 5 | 56 |
AP2 5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 GVr+ k +gr+ A Ird +rk+++lg+f+t eeA a+ +++le+e PHT57666.1 279 GVRRQK-NGRYGAVIRDtI----RRKQVWLGTFDTVEEASLAHFSKKLELENE 326 9**888.8*********33....35*********************9999986 PP | |||||||
3 | AP2 | 29.9 | 1.4e-09 | 561 | 606 | 5 | 54 |
AP2 5 GVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 G+r+ k +g++ A I d + ++k+++lg+f+t eeA +a+ + ++e PHT57666.1 561 GIRRQK-TGKYGAVITD----KiRHKQIWLGTFDTVEEASQAYFSKKFEFE 606 899777.9*********....4345******************88887776 PP | |||||||
4 | AP2 | 34.2 | 6.5e-11 | 710 | 757 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 GVr+ k +gr+ A +rd + +rk+++lg+f+t eeA +a+ + +le+ PHT57666.1 710 VGVRRQK-NGRYGAVVRD----KiRRKQVWLGTFDTVEEASQAYFSKKSELEK 757 59**888.8*********....5456******************998888876 PP | |||||||
5 | AP2 | 31.5 | 4.5e-10 | 867 | 913 | 4 | 54 |
AP2 4 kGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 +G+r+ k +gr+ A I d k+k+++lg+f+t eeA +a+ + +l+ PHT57666.1 867 RGIRRQK-SGRYGAVITD----RiKHKKVWLGTFDTVEEASQAYLSKKSELK 913 9***888.7*********....4446******************88877765 PP | |||||||
6 | AP2 | 25.5 | 3.3e-08 | 976 | 1013 | 6 | 46 |
AP2 6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaa 46 V+ +k +g++ eIr p ++ kr++lg+f taeeA + + PHT57666.1 976 VHKRKGSGKYTTEIRNP----ISkKRIWLGTFNTAEEASRVY 1013 888999999*******7....246**************9977 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1190 aa Download sequence |
METDEQGLLA GENEEETSCK KQKITQIVVD KVKFTIPLEH TNHKAQTTSV ATERSKETDS 60 KMALFGNEWQ NMGTFLGSEE FKGFSSNMHK FQGKETSCIM SNVHGIESFG ECNTSISSGK 120 GKISLIGIRR QKTGRYGAVI RDTIRRKQVW LGTFDTVEEA SQAYFNKKLE LENEKLNQQG 180 NKEDRPEENC DQIQQPESPV VQCLSMANDQ TSDTACVNRI NSHETTHIVE VHKNKMSGEE 240 PGSSKETACG MASVRGTESS VECNTSTSCN SKGEISLIGV RRQKNGRYGA VIRDTIRRKQ 300 VWLGTFDTVE EASLAHFSKK LELENENLNQ QGNKESKSKE NIDQIQQPES PSVQCLSVGN 360 DQIQPPESPS VQCLSVANDP IQQPESPSLQ CLSVADDQIQ QPESPGAQCL SVANDQIQQP 420 ESHRVRCLSV ANDQIQQPES PGVQCLSVGN DQIQPPESSS VQCLSVANNQ TLDTASVSRI 480 NSHITTTHIL GVHKKNWSGK EQEFSKVTSC LMANVQGTES SNECSTTTSC LPTEKRSLLG 540 IRRQKNGRYG AVITDKRSLL GIRRQKTGKY GAVITDKIRH KQIWLGTFDT VEEASQAYFS 600 KKFEFEKLSQ QDNKDNKPKE NLDQIQQPES PVMQCLSMAI DPTLDTAGVN RINPHETTHI 660 VEVHKNNMSG KEPGSSIETP CLMASVHGTE SSAECNTSTS CNPTGKISLV GVRRQKNGRY 720 GAVVRDKIRR KQVWLGTFDT VEEASQAYFS KKSELEKKKL NQQRNKDNRS KKNGDRIQQP 780 GSPVVLASLS VTDVQEFDTA SVGMRNERID FHKTTHIVGV LKSKTAGKEP ESSKETTCLM 840 DNVHDTESYD EGNTTTSRDP TAKRSLRGIR RQKSGRYGAV ITDRIKHKKV WLGTFDTVEE 900 ASQAYLSKKS ELKKLERQSD KEDKPKKNCD QVQQPESHVV ASFPVANHDQ TLNAARVDRR 960 YKRFDPHETE TRYFRVHKRK GSGKYTTEIR NPISKKRIWL GTFNTAEEAS RVYQSNKLEF 1020 QKLVHAKRQC SNEQTCSKQD GKSEKLVNIK QGHENVDSEL ESAGGSKIVV QVSNSSNGGT 1080 EQRIDSHEIG TCKEAFYDYL SNKFDLQISN KVELQSNMPT DSSAREEKQE GQEDDEDLWM 1140 GEWVQLPGNR AVKFSLKLGL PIIDNYGSLL GEFSTLDDLS ICKTEDGNET |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 726 | 732 | DKIRRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 1e-11 | ERF family protein |