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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT57665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 1012aa MW: 114444 Da PI: 9.8763 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30 | 1.3e-09 | 45 | 88 | 5 | 52 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 G+r++k +gr+ A I d +k+k ++l +f+t eeAa+a+ +++ PHT57665.1 45 GIRRRK-SGRYSATITDR---NKHKEVYLDTFDTIEEAAQAYQSKKLE 88 9**999.7******9993...456*****************9776655 PP | |||||||
2 | AP2 | 26 | 2.2e-08 | 168 | 215 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 + G+ ++k +gr+ A I d + k+k ++lg+f+t e+A +a+ + ++e PHT57665.1 168 VIGIKRRK-SGRYSATITDrV----KHKEVYLGTFDTTEGASQAYFSKKSEFE 215 67999888.7*********54....35******************87776666 PP | |||||||
3 | AP2 | 39.6 | 1.3e-12 | 225 | 273 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 +++ GV+ +k +gr++++Ir p ++ kr+++g+f taeeAa+a+ +++ PHT57665.1 225 PHIIGVHKRKATGRYESQIRNP----ISkKRIWVGSFSTAEEAARAYQSKKLE 273 5789*****************7....246******************776665 PP | |||||||
4 | AP2 | 36.3 | 1.4e-11 | 354 | 401 | 5 | 56 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 G+ ++k +gr++AeI dp +r kr +lg+f+t eeA +a+ + ++e+e PHT57665.1 354 GIKRRK-SGRYAAEITDP----IRhKRLWLGTFDTVEEASQAYLSKKFEFENE 401 888888.8*********7....357******************9999999876 PP | |||||||
5 | AP2 | 32.9 | 1.6e-10 | 467 | 514 | 5 | 56 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 G+ ++k +gr++AeI dp +r ++++lg+f+t eeA +a+ + ++e+e PHT57665.1 467 GIKRRK-SGRYAAEITDP----IRhTKVWLGTFDTVEEASQAYLSKKSEFENE 514 888888.8*********7....357******************9998888875 PP | |||||||
6 | AP2 | 33.5 | 1.1e-10 | 600 | 644 | 5 | 53 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 G+r++k +gr++A I dp + k+++lg+f+t eeA +a+ + ++ PHT57665.1 600 GIRRRK-SGRYAAKITDPM----KhKQVYLGTFDTIEEASQAYLSKKSEF 644 99*999.7*********84....35******************8776665 PP | |||||||
7 | AP2 | 34.6 | 4.9e-11 | 720 | 765 | 5 | 54 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 G+ ++k +gr++AeI dp +r kr +lg+f+t eeA +a+ + ++e PHT57665.1 720 GIKRRK-NGRYAAEITDP----IRhKRLWLGTFDTVEEASQAYLSKKSEFE 765 888888.8*********7....357******************88776665 PP | |||||||
8 | AP2 | 33.4 | 1.1e-10 | 801 | 847 | 2 | 51 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 ++ GV+ +k +gr+ ++I+ p ++ kr++lg+f taeeA +a+ ++ PHT57665.1 801 HIVGVHKRKATGRYTSQIKNP----ISkKRIWLGSFRTAEEASQAYQSKKL 847 789**************9997....246*****************976665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1012 aa Download sequence |
MESSSIAING ASAVVMAERS KKRDGENLKQ PKEPESTKAK RSLIGIRRRK SGRYSATITD 60 RNKHKEVYLD TFDTIEEAAQ AYQSKKLEFQ KIVDANRQCG NEIDVQISNS TNDGAEQRID 120 GQELGIVEED FRVYQSKKQR EFSCLMGKES SDECNITTSC DSNVKRSVIG IKRRKSGRYS 180 ATITDRVKHK EVYLGTFDTT EGASQAYFSK KSEFEKKYDP HKTTPHIIGV HKRKATGRYE 240 SQIRNPISKK RIWVGSFSTA EEAARAYQSK KLEFQKLVDA KRQCGNENDV QISNSENDGA 300 ERKIDCHETG IVEEDFRVYQ SEEKREFSCL KSKESSDEYD ITTSDSNVKK SLIGIKRRKS 360 GRYAAEITDP IRHKRLWLGT FDTVEEASQA YLSKKFEFEN EKLRQQGNKK NKPIKSFDQI 420 WPESPVVETL DTASMGRRNA RIDSQTSSDE CNTTTRCDPK SKRSLIGIKR RKSGRYAAEI 480 TDPIRHTKVW LGTFDTVEEA SQAYLSKKSE FENEKLRQQG NKKNKPIKSF DQIWPESPVV 540 ETLNTANMGR RSIRIDSQGK EPGSSKATSG LMTNVRGAES SDECNITTNG DPKAKISLIG 600 IRRRKSGRYA AKITDPMKHK QVYLGTFDTI EEASQAYLSK KSEFEKVSQR GEKENKPKRN 660 CDQIQHESSV METLNTTSMG RRNARIDSQG KELRFSEKTS SDGCNTTTRC NPKSKRSLIG 720 IKRRKNGRYA AEITDPIRHK RLWLGTFDTV EEASQAYLSK KSEFEKLSQG DKEDRSKKKC 780 DQVQQPESSP VAAASLPVDT HIVGVHKRKA TGRYTSQIKN PISKKRIWLG SFRTAEEASQ 840 AYQSKKLEFQ KLVEAKQQQR ANKKQTHSKH DGKSKKLVNV KQEHENDNCE LKSVGGSEIK 900 GPISNSSSGG TDQRINSHET GTPEEAFHAY LSKKLDSQSS KEVEVQNNMP TDSSAGKKQD 960 GQEDDKDILM GQWIQLPGDR EVMFSLKLGL PIIDNYGSLL GEFSSMDDLS IS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 1e-14 | ERF family protein |