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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT57664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 719aa MW: 80917 Da PI: 9.4668 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.7 | 1.4e-08 | 82 | 128 | 5 | 55 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 G+ k +gr+vA+I dp + k++++g f+t eeA +a+ + ++e+ PHT57664.1 82 GIKKQK-NGRYVARITDPI----KhKQVPVGVFDTIEEASQAYLSKKSEFEN 128 777666.8*********72....46******************988877765 PP | |||||||
2 | AP2 | 26.4 | 1.8e-08 | 160 | 199 | 3 | 45 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 + G +++kk+gr+ + I+ p + k++slg+f+taeeA +a PHT57664.1 160 IIGAYRRKKTGRYYSKIMNPI----TkKNISLGTFDTAEEASRA 199 66779***********99972....36***************98 PP | |||||||
3 | AP2 | 22.8 | 2.3e-07 | 413 | 452 | 5 | 48 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaia 48 G+r+ k +gr++A I dp + k + lg+f+t eeA +a+ PHT57664.1 413 GIRRQK-SGRYAAVITDPI----ThKEVCLGTFDTIEEASQAYFS 452 999888.8*********82....47*****************965 PP | |||||||
4 | AP2 | 32.5 | 2.1e-10 | 509 | 549 | 2 | 45 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 ++ GV+ k+ g++ +eIrdp + ++++lg+f+taeeA a PHT57664.1 509 HIIGVYKSKSLGKFTSEIRDPI----TkRTIWLGTFDTAEEASHA 549 789*****************72....36**************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 719 aa Download sequence |
MAMKTDGIAL FTDEEEETCY KKQKTRKVSE IFVDKVNSTN HSCLMSIGKK TGLMTKVRGA 60 ESCDECNVST CCDSKAKISL TGIKKQKNGR YVARITDPIK HKQVPVGVFD TIEEASQAYL 120 SKKSEFENKW KKNFEQPESP SVSASGTDRR IDSRERTTRI IGAYRRKKTG RYYSKIMNPI 180 TKKNISLGTF DTAEEASRAF QSKKLEFQKL VDVKQEQCAN KHSRSNQDGT TLSGGLVNVK 240 RERENLICHE RFQHGGEAFR VCQSKNKQAF SCNTTTSWNT KAKRSFVGIK RQMDGRYAAV 300 ITDRVKHRKV WFDTFDTIEE ASQAYSSKKS EFEELSQQGN KENKSMKNCD QIQQPESSSV 360 EGRREKRIDS HGKEAGSSKA RSCLMTNVCS GESPDERSIT TNCDPKAKMS LIGIRRQKSG 420 RYAAVITDPI THKEVCLGTF DTIEEASQAY FSKKSEFDKL RQQGKTENKL KKNCDPIQQP 480 ESSSVMASLD TAGGSGRGKR IESHKRTTHI IGVYKSKSLG KFTSEIRDPI TKRTIWLGTF 540 DTAEEASHAF QSKKLEFQKL VQAKQKQCTH KQTHSKEDRK SEKSVHAKKE HENLNCGLES 600 VGGPRIDFPM SNTSNGGTDQ RINPHETGIA EDTFHACLSE KFYSQSSKEV ELQSNMSTDS 660 CAGKNQQGQE DDDKDLWMGK WVQLGDRTVM FSLKLGLPII DNYGSLLGEF SSLDDLSII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 3e-11 | ERF family protein |