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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT57663.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 445aa MW: 51192.5 Da PI: 10.1912 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.7 | 6.9e-09 | 18 | 55 | 5 | 46 |
AP2 5 GVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaa 46 G++ + k+gr++A d rk+ +lg+f+t eeA +a+ PHT57663.1 18 GIW-RQKNGRYAAVFTD----RiTRKKLWLGTFDTIEEASQAY 55 886.5559******555....2235*****************9 PP | |||||||
2 | AP2 | 24.9 | 5.1e-08 | 57 | 87 | 19 | 56 |
AP2 19 IrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 Ir+ kr++lg+f+t eeA +a+ + +++le+e PHT57663.1 57 IRH-------KRVWLGTFDTVEEASQAYFNKKLELENE 87 444.......*************************986 PP | |||||||
3 | AP2 | 24.1 | 9.2e-08 | 137 | 181 | 7 | 55 |
AP2 7 rwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 r + ++gr+ A I d + +rk+++lg+f+t eeA +a+ + +l++ PHT57663.1 137 R-RQQNGRYGAVITD----QiRRKQVRLGTFDTVEEASQAYFSKKSELKN 181 5.5559*********....4456******************998888876 PP | |||||||
4 | AP2 | 30 | 1.3e-09 | 207 | 252 | 5 | 54 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 G+r++k +gr+ A I dp + k ++lg+f+t e+A +a+ + + ++e PHT57663.1 207 GIRRRK-SGRYSAKITDPI----KhKEVYLGTFDTTEQASQAYFNKKSEFE 252 9**999.7*********72....46******************98877766 PP | |||||||
5 | AP2 | 23.8 | 1.1e-07 | 302 | 339 | 5 | 45 |
AP2 5 GVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAaka 45 G + k+ gr+ +eI + + k+++lg+fgtaeeA a PHT57663.1 302 GAYKSKTAGRYTSEIIHsI-----TkKKIWLGTFGTAEEASHA 339 55788999*******9933.....35**************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
MRGVTYADEC NTKRSLTGIW RQKNGRYAAV FTDRITRKKL WLGTFDTIEE ASQAYRIRHK 60 RVWLGTFDTV EEASQAYFNK KLELENEILN QQGNHIQQSL ADVETFDTAS VGTESTNERN 120 VTASSLPTAK RCLRTIRRQQ NGRYGAVITD QIRRKQVRLG TFDTVEEASQ AYFSKKSELK 180 NEKLNQQCTN MHTRSEQGPK DEISLIGIRR RKSGRYSAKI TDPIKHKEVY LGTFDTTEQA 240 SQAYFNKKSE FEKLRQQRQT ENIRKRNCDQ IQQPVASLDT AASARARHKR TDSHITTPHM 300 IGAYKSKTAG RYTSEIIHSI TKKKIWLGTF GTAEEASHAF QSKKLEFQKL VKAKKQHCTQ 360 SKPEKLVNFK QGTAEETFHV NQSKKFDLQS SKDVELQSDI PTDSSAGKKQ EEQEDDEDLW 420 MGKWVQLPGD REVKFSLKLG LPNHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 6e-11 | ERF family protein |