PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57639.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family AP2
Protein Properties Length: 709aa    MW: 79660 Da    PI: 8.3415
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.37e-123380556
         AP2  5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                G+r+ k +gr++A+I dp    +r k+++lg+f+t eeA +a+ a + ++++e
  PHT57639.1 33 GIRRQK-SGRYAARITDP----IRhKKVWLGTFDTIEEASQAYFAKKSEFHNE 80
                999888.8*********7....357********************99999986 PP

2AP225.72.8e-08220264754
         AP2   7 rwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 
                 ++++k+gr+ A+I dp        ++++lg+f+t eeA +a+   + ++e
  PHT57639.1 220 TRREKSGRYSARITDP-----ImhTKVHLGTFDTIEEASQAYLSKKSEFE 264
                 467779*********8.....457******************88776665 PP

3AP232.13e-10309355454
         AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                  G+r++k +gr++AeI dp     + ++++lg+f t eeA +a+   + ++e
  PHT57639.1 309 VGIRRRK-NGRYFAEITDPI----KhQKVYLGTFNTIEEASQAYLSKKSEFE 355
                 59**999.8*********72....46******************88776665 PP

4AP230.21.1e-09399441450
         AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50 
                  G+r++k +gr++AeI dp     + ++++lg+f+t e+A +a+   +
  PHT57639.1 399 VGIRRRK-NGRYFAEITDPI----KhQKVYLGTFDTIEQASQACLSKK 441
                 69**999.8*********72....46**********888888876555 PP

5AP228.92.8e-09491535552
         AP2   5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                 GV   k+ gr+ +eI  p     + k+++lg+f+taeeA  a+   +++
  PHT57639.1 491 GVNKSKTIGRYTSEITNPI----TkKKIWLGTFDTAEEASHAYQSKKLE 535
                 9*************99972....36*****************9776665 PP

Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MDNKEDFNCN KLVVNIEQGI EVESCNDKLS LIGIRRQKSG RYAARITDPI RHKKVWLGTF  60
DTIEEASQAY FAKKSEFHNE KLSHQGSKKG KRIHETLRFG GVHKKKKRGK YYYESTSPIS  120
KKRVWLGTFG AAGEGSWVDH HSKKLEFEQD GKLEVDVSIS NADNVGIDRK IDCHEIGTAV  180
EASRVFDSCL MANVRGAESS DECNVPRNGD PKDKISLVGT RREKSGRYSA RITDPIMHTK  240
VHLGTFDTIE EASQAYLSKK SEFEKLRKGN KVNKPKKNCD RIQQPESPSV VETVNTAASC  300
DPKAMRSLVG IRRRKNGRYF AEITDPIKHQ KVYLGTFNTI EEASQAYLSK KSEFEKLRQG  360
NKDNKPKKNC DQIQQPESTS VLETLNTATS CDPKDKSLVG IRRRKNGRYF AEITDPIKHQ  420
KVYLGTFDTI EQASQACLSK KSEFEKLRQG NKDNKTEPEP PSVVASLDTA VSANGRDKRI  480
GSRKRKAHTV GVNKSKTIGR YTSEITNPIT KKKIWLGTFD TAEEASHAYQ SKKLEFQNLV  540
KAKQQQCTKT QTHSEQDAEK EKSVNVEQGH ENVNCEPFQP ESSVGSPDVD VLLSNASSGE  600
TVQSTDSDKI GNTEEAFHVY QSKKLDDSES PQKVELQSNT QTDSSAGEKQ EGQEDDEDLW  660
MGEWMQLPGN RAVKFSLKLG LPIIDNYGYL LGEFSSLDDL SICETEDDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1483513RKRKAHTVGVNKSKTIGRYTSEITNPITKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-13ERF family protein