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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT46696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 456aa MW: 50210.9 Da PI: 8.3398 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.8e-17 | 133 | 182 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PHT46696.1 133 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHTAARAYDRAAIKFRG 182 78*******************......55************************997 PP | |||||||
2 | AP2 | 39.4 | 1.5e-12 | 225 | 273 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 s+++GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k PHT46696.1 225 SKFRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKT 273 79********.7******5553..2.26**********99**********886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence |
MMLDLNVNVI YNELPEGSVP DESGTSNSSL LNAEATTSTG DGESCSTRAG ELFAFNFGIL 60 KVGGAETSRN INNNDEDRRV VSHSEFVTRQ LFPVDNGELN RKETDRVILP GFGSELPKPQ 120 VKKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHTAA RAYDRAAIKF 180 RGVDADINFN LSDYEEDMKQ MKNLGKEEFV HLLRRHSNGF SRGSSKFRGV TLHKCGRWEA 240 RMGQFLGKKY IYLGLFDSEV EAARAYDKAA IKTSGREAVT NFEPSAYEGE TMSEPQIEGS 300 QHDLDLNLGI STSSSKENGR LGGSCYHPYD IQDATKPKMH KPGPLIVGSS HLKGLPMTSQ 360 QAQSWTGIYS NFSSSYEGRT SDKRKDIGSS QGPPNWSLQM PSQVATTTPL TMFCTAASSG 420 FFVPATASIT SSTSALAPST NASQCFYQIS PRLPPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-111 | AP2 family protein |