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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT44185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 255aa MW: 29303.9 Da PI: 9.6814 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.2 | 1.6e-31 | 30 | 79 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ PHT44185.1 30 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 79 79***********************************************8 PP | |||||||
2 | K-box | 110 | 2.5e-36 | 97 | 194 | 3 | 100 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++s+ s +ea+++++qqe++kL+++i+ +q+ +R+++Ge L+sLs ++L++Le +Lek++ ++RskKnell+++ie++qk+e elq++n++Lr+k++e PHT44185.1 97 STSTGSISEANTQYYQQEASKLRRQIRDIQTYNRQIVGEALSSLSPRDLKNLEGKLEKAIGRVRSKKNELLFSEIEHMQKREIELQNANMYLRAKIAE 194 45556699***************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MVFPNNHELD ESSSQLRKSS GGGRGKIEIK RIENTTNRQV TFCKRRNGLL KKAYELSVLC 60 DAEVALIVFS SRGRLYEYAN NSVRATIDRY KKHHADSTST GSISEANTQY YQQEASKLRR 120 QIRDIQTYNR QIVGEALSSL SPRDLKNLEG KLEKAIGRVR SKKNELLFSE IEHMQKREIE 180 LQNANMYLRA KIAEVERAQE QMNLMPGGGG SDQYHHHQAA NYEDARNNFL PVNLLEPNPH 240 YSRRPDDDQT PLRLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58780.1 | 4e-99 | MIKC_MADS family protein |