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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT34760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 454aa MW: 50140.1 Da PI: 7.4174 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.6e-17 | 153 | 202 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PHT34760.1 153 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 202 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence |
MMLDLNLSAI YDEKIPEGSV ADESEVGSSN SSARNAEACS SAGDDETCST RAAGSGDIFA 60 FNFNILKVGH GGDERNRSCC NNDDDHHHRS KYVTQQLFPV NTAELNTRAH TSQNADWIDR 120 STYDPANTVG FREMPKQQQP VKKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL 180 GGFDTAHAAA RAYDRAAIKF RGVDADINFN LSDYEEGMKQ MSNLSKEEFV HVLRRQSTGF 240 SRGSSKYRGV TLHKCGRWEA RMGQFLGKKA YDKAAIKCNG RDAVTNFEPS AYEGEPNSNP 300 QIEGSQQDLD LNLGIATSSP KEIERSSVFQ YHPYDMQEST KSQMDKSGSQ TVVSSHFKGL 360 PAVTSEQAHL WNGVYSNFFP SYEERASGKR IDVGTSHGHP NWAMQMHGQV GTTSMSMFSA 420 AASSGFSTPA TTASASVMSG PNNPNNLNLS FASY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 1e-103 | AP2 family protein |