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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT32370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 191aa MW: 21970.4 Da PI: 9.8235 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.9 | 1.7e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri++k rqv f+kRr+g+lKKA+ELS+LCd++v v+i+s++g+l+e++s PHT32370.1 9 KRIQDKNCRQVAFCKRRKGLLKKAKELSILCDVDVGVVIISNRGRLHEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 39.5 | 2.4e-14 | 98 | 166 | 29 | 98 |
K-box 29 enLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e Lq++ R+l e+++ + +L +Le++L ++l +iRs+K++l+le+i+ lq+kek l ee+k+L++++ PHT32370.1 98 ELLQETERQLE-ENVDGVTATDLIHLENELLTALVQIRSRKTHLMLESIKGLQEKEKLLLEEKKQLENNM 166 67899988876.******************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MGRRKVEIKR IQDKNCRQVA FCKRRKGLLK KAKELSILCD VDVGVVIISN RGRLHEFAST 60 NSLTGILQRY ESHAAAEKEI SAEIQDAESK FSSMTTGELL QETERQLEEN VDGVTATDLI 120 HLENELLTAL VQIRSRKTHL MLESIKGLQE KEKLLLEEKK QLENNMARMK KNRRVNEKSD 180 LPQQRVTLNF L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65060.1 | 1e-31 | MIKC_MADS family protein |