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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT31295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 690aa MW: 76189.5 Da PI: 6.6844 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.1 | 1.6e-11 | 266 | 322 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g PHT31295.1 266 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 322 57*******************4444.2455535555.779999**************98 PP | |||||||
2 | AP2 | 46.7 | 7.9e-15 | 365 | 416 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PHT31295.1 365 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 416 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 690 aa Download sequence |
MSSMNNWLGF SLSPHEEVLT SQQSSHQECF DLMTSHHHHH ESTVVLPSLN VVPHDNTPFG 60 IFEAFNRNHH HQSQDWNTDD TNYKTTSEMS MLMGGSCNGQ HLENNQEPPK LENFLGIGEQ 120 KLQQVCSNNN NNTNNNGDYS IYCSPPSNII SENNANNIIG LSMIKNWLRN NPNTTTVATT 180 TTNPSCQDDK KDNGGVMVVV GGGGNAQSLS LSMSTGGGGG ENSCSSENNK QEIVNGNNGS 240 IIDGQISGAI EVVPKKSIDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQTRKGRQ 300 GGYDKEEKAA RAYDLAALKY WGPTTTTNFP ISSYEKELEE MKHMTRQEYV ASLRRKSSGF 360 SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV 420 TNFEINRYDV KSILESSTLP IGGAAKRLKD VEQAEIALDY QRASQENIVN THLITSGSVG 480 SYGASHCWPN IALQQAQPLS AMHSYPYSQP RVWCKQEVQD SSDHLNVTSQ SYQDFHPLQL 540 GNGHNFMQTN SALHNLMGLD NSSMDHNSVA YHQGVGYASN GGNNHGVGFV LPHLSSIIPH 600 QESNHQQSQA NGYGENEVKQ LQLGNENLFG YYNSQQSTSN GSIKAGLYDH QESTCNNWMS 660 TAVPVALASR SNTMAVCHGA APTFTVWNDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20840.1 | 1e-125 | AP2 family protein |